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Seaborn clustermap clustered data
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Seaborn clustermap clustered data
#1
Dear all,
I am using seaborn clustermap to produce an heatmap with clustering starting with thousands of rows. Because of this not all the row names are displayed in the final plot. Is there a way to output the original table used to generate the clustermap but in the same row/column order that is calculated after the clustering.
Thanks for the help
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#2
I'll say yes, but it depends on the algorithm used for the heat map.
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#3
So you are suggesting to perform the same clustering clustermap does on the table and get the output from there. Actually, that triggered possibly a better idea. I could work out the clustering on the table and then print the result as a heatmap. I'll try that. Thank for the suggestion!
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