Help with python code to search string in one file & replace with line in other file

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Help with python code to search string in one file & replace with line in other file

mforthman
Programmer named Tim

Posts: 9

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Joined: Dec 2017

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Dec-15-2017, 07:06 PM

(Dec-15-2017, 05:18 PM)Larz60+ Wrote: Is this your original post?: https://www.biostars.org/p/277903/
Can you provide a link to the original sequence file so I can play with it?

Yes that is the original post but never made more progress. I'm expecting data back soon and this file needs to be properly formatted so I can process the data we receive.

I can provide a link (here), but I cannot provide the complete sequence files since a good portion of it is unpublished. What I can provide are the example sequences I have given in the post and a few additional more for both file1 and file2. These files are fully representative of the complete sequence files.

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Messages In This Thread

Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-15-2017, 03:19 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-15-2017, 05:18 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-15-2017, 07:06 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-15-2017, 07:25 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-15-2017, 10:43 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-16-2017, 06:39 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-16-2017, 12:58 AM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-16-2017, 02:39 AM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-16-2017, 06:56 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-16-2017, 08:22 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-17-2017, 03:27 AM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 01:09 AM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-18-2017, 01:30 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 05:31 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 05:58 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-18-2017, 07:51 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 08:33 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-18-2017, 09:44 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 09:49 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-18-2017, 09:54 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 10:16 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 10:34 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-18-2017, 11:29 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-19-2017, 02:47 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-19-2017, 03:51 PM

RE: Help with python code to search string in one file & replace with line in other file - by mforthman - Dec-19-2017, 04:01 PM

RE: Help with python code to search string in one file & replace with line in other file - by Larz60+ - Dec-19-2017, 07:11 PM

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