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Thread: Sequential Decision Making
Post: RE: Sequential Decision Making
| Yes, this part creates the error. If you compile it on your interpreter, you must see the same error. |
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erdemath |
Data Science |
2 |
1,140 |
Feb-10-2023, 06:30 AM |
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Thread: Sequential Decision Making
Post: Sequential Decision Making
| I am generating a sequential decision making model. I am using tensorflow.keras.sequantial.
But any time I train my model, I have the following error
Error:assert_input_compatibility
str(tup... |
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erdemath |
Data Science |
2 |
1,140 |
Feb-09-2023, 09:20 PM |
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Thread: networkx package is not visible in singularity container image
Post: RE: networkx package is not visible in singularity...
| We can use our container with the installation I described above. I can upgrade it later again with your instructions. |
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erdemath |
General Coding Help |
11 |
2,309 |
Oct-14-2022, 11:56 AM |
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Thread: networkx package is not visible in singularity container image
Post: RE: networkx package is not visible in singularity...
| [*] First, here is the complete recipe for my .def file
BootStrap: library
From: ubuntu:20.04
%post
export DEBIAN_FRONTEND=noninteractive
apt-get -y update
apt-get -y install build-essent... |
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erdemath |
General Coding Help |
11 |
2,309 |
Oct-14-2022, 08:52 AM |
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Thread: networkx package is not visible in singularity container image
Post: RE: networkx package is not visible in singularity...
| Quote:From your 'container' (which I think is a virtual environment), can you access a command line (as in terminal, or 'cmd' in windows)?
Yes! Also, yes container is a virtual environment.
All were ... |
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erdemath |
General Coding Help |
11 |
2,309 |
Oct-12-2022, 10:31 PM |
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Thread: networkx package is not visible in singularity container image
Post: RE: networkx package is not visible in singularity...
| This is how I performed the installation, and it did not work either. Installation in container for some python packages is not as in the actual linux environment. I was suggested to craft some contai... |
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erdemath |
General Coding Help |
11 |
2,309 |
Oct-12-2022, 09:11 AM |
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Thread: networkx package is not visible in singularity container image
Post: RE: networkx package is not visible in singularity...
| Yes, this how I installed. But, I do not see it inside the container if I shell into the container as a user. I only see it if I shell into the container as the root. The main goal is to run python in... |
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erdemath |
General Coding Help |
11 |
2,309 |
Oct-07-2022, 08:05 PM |
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Thread: networkx package is not visible in singularity container image
Post: networkx package is not visible in singularity con...
| I have singularity-ce version 3.10.2 on my ubuntu 20.04. I created my own Python library in a self built singularity container. I installed networkx package
through pip in the library with no error. H... |
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erdemath |
General Coding Help |
11 |
2,309 |
Oct-07-2022, 02:33 PM |
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Thread: python installation/running inside singularity container
Post: RE: python installation/running inside singularity...
| (Sep-20-2022, 09:44 PM)rob101 Wrote: Not that I know the first thing about singularity-ce, but what I can see (or what I think I can see) is that you're trying to run a bash command (apt-get -y upda... |
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erdemath |
General Coding Help |
2 |
1,813 |
Sep-21-2022, 08:13 AM |
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Thread: python installation/running inside singularity container
Post: python installation/running inside singularity con...
| I have singularity-ce version 3.10.2 on ubuntu 20.02. I am trying to install python package. It always says;
Error:Singularity> apt-get -y update
bash: apt-get: command not foundHow can I resolve ... |
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erdemath |
General Coding Help |
2 |
1,813 |
Sep-18-2022, 05:16 PM |
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Thread: Python in Singularity Container on Ubuntu
Post: Python in Singularity Container on Ubuntu
| I have ubuntu 20.04 and downloaded singularity 3.10.2. I created a container wherein I need to download, install, run my python codes.
Here is the issue anytime I try to run my container;
[inline]
s... |
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erdemath |
General Coding Help |
0 |
916 |
Aug-31-2022, 02:17 PM |
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Thread: scatter3D different markers per data
Post: RE: scatter3D different markers per data
| (May-27-2022, 03:38 PM)deanhystad Wrote: (May-27-2022, 09:03 AM)erdemath Wrote: data_A, data_B, data_C are numpy arrays belonging to the regions A,B and C.What are the dimensions of data_A, data_B... |
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erdemath |
Data Science |
5 |
1,754 |
May-27-2022, 03:55 PM |
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Thread: scatter3D different markers per data
Post: RE: scatter3D different markers per data
| Sorry! I made a typo in the code. Here's the corrected lines, it must be clearer now what I do with the variable 'region';
data_all = np.vstack((data_A, data_B, data_C))
fig, ax = plt.subplots(figsiz... |
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erdemath |
Data Science |
5 |
1,754 |
May-27-2022, 09:39 AM |
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Thread: scatter3D different markers per data
Post: RE: scatter3D different markers per data
| data_A, data_B, data_C are numpy arrays belonging to the regions A,B and C. |
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erdemath |
Data Science |
5 |
1,754 |
May-27-2022, 09:03 AM |
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Thread: scatter3D different markers per data
Post: scatter3D different markers per data
| I have an issue with data visualization in 3D scatter plot. I have regionally stratified some data, say data_A, data_B, data_C. I need to display them in 3D scatter plot with different markers, or col... |
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erdemath |
Data Science |
5 |
1,754 |
May-26-2022, 01:09 PM |
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Thread: Process finished with exit code 137 (interrupted by signal 9: SIGKILL)
Post: RE: Process finished with exit code 137 (interrupt...
| (Apr-18-2022, 06:08 PM)DeaD_EyE Wrote: This is an OOM (Out-Of-Memory).
The sigkill comes from the Kernel because it's out of free memory.
buy more RAM
use an iterative approach to process data in s... |
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erdemath |
General Coding Help |
2 |
9,573 |
Apr-18-2022, 08:40 PM |
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Thread: Process finished with exit code 137 (interrupted by signal 9: SIGKILL)
Post: Process finished with exit code 137 (interrupted b...
| I urgently need help with the following error message. I run pycharm on ubuntu 20.04.
I need to save data (as .npy) approximately 15 GB size. At the saving point, I always see
error message below;
E... |
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erdemath |
General Coding Help |
2 |
9,573 |
Apr-18-2022, 09:21 AM |
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Thread: Python 3.8 on Ubuntu 20.04
Post: Python 3.8 on Ubuntu 20.04
| Hi,
Every time I start PyCharm Community through ubuntu terminal I see the following warning messages. And I believe this slows down my code from #
saving figure. Any solution for that?
2022-03-07 1... |
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erdemath |
General Coding Help |
1 |
1,376 |
Mar-07-2022, 04:33 PM |
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Thread: Finite difference scheme in python
Post: Finite difference scheme in python
| I am trying to develop central finite difference scheme (lexicographical) coefficients. My code is,
import numpy as np
from scipy.sparse import spdiags, identity
x = np.linspace(0, 9, num... |
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erdemath |
Data Science |
0 |
1,427 |
Nov-17-2021, 03:19 PM |
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Thread: Coordinate conversion
Post: RE: Coordinate conversion
| (Oct-28-2021, 11:54 AM)Gribouillis Wrote: A 17th century french author named Nicolas Boileau said
Quote:Ce qui se conçoit bien s'énonce clairement, et les mots pour le dire arrivent aisément.
Unfort... |
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erdemath |
Data Science |
8 |
2,650 |
Oct-28-2021, 12:48 PM |
